PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.E01464.1.p
Common NameMIMGU_mgv1a025068mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family WRKY
Protein Properties Length: 256aa    MW: 28879.2 Da    PI: 8.3394
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.E01464.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY90.71.2e-2892151159
                       ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                       ++Dgy+WrKYGqK+ ++++ pr+Y++C+++ +Cpvkkkv+rs +dp++++ tYeg+H+h+
  Migut.E01464.1.p  92 VKDGYQWRKYGQKVTRDNPSPRAYFKCSFSpNCPVKKKVQRSCDDPSLLVATYEGQHHHH 151
                       58***************************99***************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.1E-2887152IPR003657WRKY domain
PROSITE profilePS5081125.00687153IPR003657WRKY domain
SuperFamilySSF1182908.63E-2589152IPR003657WRKY domain
SMARTSM007743.9E-3192152IPR003657WRKY domain
PfamPF031061.3E-2393151IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    Send to blast
PHDHLIQELN RMKSENKKLT EMLTIVSINY NNLKKNQSDE ELPETRKRKA DEIENFGDFN  60
NRNNTFFNPK VIKSNVSRIH VRIDPSDTSL VVKDGYQWRK YGQKVTRDNP SPRAYFKCSF  120
SPNCPVKKKV QRSCDDPSLL VATYEGQHHH HHANVSAEPP QGVAGASEWG PHSGSKQSID  180
DVANAFTCSS KIKEAIAKNE SSDQIQHQLL VEQMASSLSR NRDFTTALAA AITGRIFEEV  240
ISENNDEIVS RSRVF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A4e-20911501371WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012847092.10.0PREDICTED: probable WRKY transcription factor 40, partial
SwissprotQ9C5T42e-60WRK18_ARATH; WRKY transcription factor 18
TrEMBLA0A022QPJ60.0A0A022QPJ6_ERYGU; Uncharacterized protein (Fragment)
STRINGVIT_09s0018g00240.t011e-63(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45002242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.29e-62WRKY DNA-binding protein 18